All About Methylation And MTHFR

“MTHFR: The Gene That Powers Detox, Mood & More.”   What is Methylation? Methylation is a natural process in the body where tiny chemical tags called “methyl groups” are added to DNA. These methyl groups are like little on/off switches that can turn genes up or down—basically, they control whether a gene gets activated or…


“MTHFR: The Gene That Powers Detox, Mood & More.”

 

What is Methylation?

Methylation is a natural process in the body where tiny chemical tags called “methyl groups” are added to DNA. These methyl groups are like little on/off switches that can turn genes up or down—basically, they control whether a gene gets activated or silenced.

To make it simpler: Imagine your DNA is like a cookbook with tons of recipes (your genes). Methylation is like putting sticky notes on certain recipes. If you put a sticky note on a recipe, it tells the kitchen (your body) not to use that recipe right now. If there’s no sticky note, the kitchen can make that dish (gene) as usual.

This process is important because it can impact aspects such as your development, health, and even your risk of certain diseases.

 

The genetic SNPs typically tested for folate metabolism are MTHFR 677T and 1298; however, there are many more. For Alex’s test, only MTHFR C667T and A1298C were tested.

Here are the key SNPs (single-nucleotide polymorphisms) commonly associated with folate metabolism:

 

 

 

 

🔬 Major SNPs in Folate Pathway

Gene SNP (rsID) Effect on Folate Metabolism
MTHFR rs1801133 (C677T) Reduces enzyme activity (up to 70% if TT). Leads to higher homocysteine and lower 5-MTHF.
MTHFR rs1801131 (A1298C) Also reduces MTHFR activity, but less than C677T. It may still affect methylation if combined with C677T.
MTR rs1805087 (A2756G) Affects methionine synthase, which uses 5-MTHF to regenerate methionine.
MTRR rs1801394 (A66G) Impacts methionine synthase reductase, required to keep MTR active. Can elevate homocysteine.
SHMT1 rs1979277 Involved in folate cycle—important for converting folate to usable forms.
DHFR Various, incl. 19-bp deletion Impacts folic acid conversion; affects folate availability in tissues.
SLC19A1 (RFC1) rs1051266 (G80A) Affects transport of folate into cells; may influence folate status.

📌 Most Well-Known: MTHFR C677T & A1298C

  • C677T (rs1801133): Common in ~10-20% of people (TT genotype) in some populations
  • A1298C (rs1801131): Often co-occurs with C677T
  • Compound heterozygotes (one of each variant) may also impair folate metabolism significantly

🧬 Why This Matters:

These SNPs can lead to:

  • Reduced ability to convert folic acid into active folate (5-MTHF)
  • Higher homocysteine levels (a heart and brain health risk)
  • Greater need for activated forms of folate (like folinic acid or 5-MTHF)
  • Methylation imbalances (affecting mood, detox, gene regulation)

 

The results can have one of 5 outcomes:

Normal, Mild impact, moderately impacted, severely impacted and beneficial

Overview of the results:

Methylation MTHFD1  1958 G>A GA moderately impacted
MTHFR 677 C>T TT Severely impacted
1298 A>C AA normal 
MTR  2756 A>G AA normal
MTRR  66 A>G GG moderately impacted
CBS  699 C>T TC impacted
COMT  472 G>A AG  moderately impacted

To read more, click the links below:

Intro: Methylate or not to Methylate,

MTHFR part 2,

MTHFR Part 3: Folic Acid and Folate Cycle,

MTHFR Part 3.2 Folate Cycle continues,

MTHFR Part 3.3 Folate Cycle cont.- Urea Cycle,

MTHFR Part 3.4 Folate Cycle cont – Citric Acid Cycle,

MTHFR Part 4: Methylation Cycle – VitB12,

MTHFR Part 5: Trans-sulfuration Cycle – Vitamin B6,

Over or Under?,

MTHFR copper/Glucose/Malabsorption/Heavy Metals,

MTHFR Pyrrole,

MTHFR Part 6: Methionine Cycle,

MTHFR Part 6.1: Methionine Cycle – CBS,

MTHFR Part 6.2: Methionine/ Glutathione – CBS, The Liver Pathway,

MTHFR Part 6.3: Methionine/ Glutathione – CBS continue…,

MTHFR Part 6.4: Methionine/ Glutathione – CBS continue…,

MTHFR Part 7: HomocysteineMTHFR Part 7.2: Homocysteine continues…,

MTHFR Part 7.3: Homocysteine continues…,

MTHFR Part 7.4: Homocysteine continues…,

MTHFD1: The link to choline in the Folate Metabolism